Data Science Desktop Survival Guide
by Graham Williams |
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Biclustering |
library(biclust)
tds <- matrix(rbinom(400, 50, 0.4), 20, 20) res <- biclust(tds, method=BCCC(), delta=1.5, alpha=1, number=10) res
bicluster(tds, res)
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parallelCoordinates(tds, res, number=4)
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data(BicatYeast)
tds <- discretize(BicatYeast) res <- biclust(tds, method=BCXmotifs(), alpha=0.05, number=50) res
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parallelCoordinates(BicatYeast, res, number=4)
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plotclust(res, tds)
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tds <- tribble(~x, ~y,
1, 1, 2, 1, 1, 0, 4, 7, 3, 5, 3, 6) res <- biclust(as.matrix(tds), method=BCCC(), delta=50, alpha=0, number=5) res
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